. Mcgraw-hill, Computer models for water quality analysis

R. B. Ambrose, T. A. Wool, J. P. Wool, and R. W. Schanz, wasp4, A hydrodynamic and water quality model. Model theory, user's manual guide and programmer's guide, 1988.

S. Anderton, J. Latron, and F. Gallart, Sensitivity analysis and multi-response, multi-criteria evaluation of a physically based distributed model, Hydrological Processes, vol.35, issue.2, p.333353, 2002.
DOI : 10.1002/hyp.336

S. Anderton, J. Latron, S. White, P. Llorens, F. Gallart et al., Internal evaluation of a physically-based distributed model using data from a Mediterranean mountain catchment, Hydrology and Earth System Sciences, vol.6, issue.1, p.6783, 2002.
DOI : 10.5194/hess-6-67-2002

URL : https://hal.archives-ouvertes.fr/hal-00304650

B. Arheimer and J. Olsson, Integration and coupling of hydrological models with water quality models : Applications in Europe, 2003.

G. Arhonditsis and M. Brett, Evaluation of the current state of mechanistic aquatic biogeochemical modeling, Marine Ecology Progress Series, vol.271, p.1326, 2004.
DOI : 10.3354/meps271013

J. Augeron, P. Monestiez, and R. Habib, Spatial dependencies and sampling in a fruit tree : a new concept for spatial prediction in fruit sudies, Journal of Horticultural Science, vol.68, issue.1, p.99112, 1993.

R. Bagnold, An Approach to the Sediment Transport Problem from General Physics. Physiographic and Hydraulic Studies of Rivers. Tech. rep., Geological Survey Professional paper 422-I, 1966.

J. Bailly, P. Monestiez, and L. Philippe, Modelling spatial variability along drainage networks using geostatistics, Mathematical Geology, vol.38, issue.5, p.515539, 2006.

T. Barnwell, L. Brown, and R. Whittemore, Systems Analysis in Water Quality Management, QUAL2E -A Case Study in Water Quality Modelling Software, p.377387, 1987.

C. Bernard-michel and C. De-fouquet, Geostatistical indicators of waterway quality for nutrients, Proceedings of the Seventh International Geostatistics Congress 2, p.907912, 2004.

C. Bernard-michel, Indicateurs géostatistiques de la pollution dans les cours d'eau, Thèse de Doctorat, 2006.

K. Beven, Changing ideas in hydrology ??? The case of physically-based models, Journal of Hydrology, vol.105, issue.1-2, p.157172, 1989.
DOI : 10.1016/0022-1694(89)90101-7

K. Beven, Prophecy, reality and uncertainty in distributed hydrological modelling, Advances in Water Resources, vol.16, issue.1, p.4151, 1993.
DOI : 10.1016/0309-1708(93)90028-E

K. Beven, A manifesto for the equinality thesis, Journal of Hydrology, vol.320, 1836.

K. Beven, On undermining science ? Hydrological Processes 20, p.31413146, 2006.

G. Billen, J. Garnier, N. Brion, and N. Sanchez, La Seine en son bassin. Fonctionnement écologique d'un système uvial anthropisé, Ch. Les transformations bactériennes de l'azote, p.567590, 1998.

G. Billen, J. Garnier, A. Ficht, and C. Cun, Ecological modeling of the 50 last years of anthropogenic impact in the seine estuary, Estuaries, vol.24, issue.6, p.977993, 2001.

G. Billen, J. Garnier, and P. Hanset, Modelling phytoplankton development in whole drainage networks : The riverstrahler model applied to the Seine river system, Hydrobiologia, vol.289, 1994.

G. Billen, J. Garnier, and M. Meybeck, La Seine en son bassin. Fonctionnement écologique d'un système uvial anthropisé, Ch. Les sels nutritifs : l'ouverture des cycles, p.5315, 1998.

G. Billen, J. Garnier, and V. Rousseau, Nutrient uxes and water quality in the drainage network of the scheldt basin over the last 50 year, Hydrobiologia, vol.540, pp.1-3, 2005.

G. Billen and P. Servais, Modélisation des processus de dégradation bactérienne de la matière organique en milieu aquatique, Micro-organismes dans les écosystèmes océaniques, p.219245, 1989.

F. Birgand, Quantication and modelling of in-stream processes in acricultural canals of the lower coastal plain, 2000.

C. Blanchard, Modélisation des ux spéiques de carbone, azote et phosphore dans le bassin loire-bretagne, unpublished thesis, 2003.

B. P. Boudreau, Diagenetic Models and their Implementation, 1997.
DOI : 10.1007/978-3-642-60421-8

E. Boyer, C. Goodale, N. Jaworski, and R. Howarth, Anthropogenic nitrogen sources and relationships to riverine nitrogen export in the northeastern U.S.A., Biogeochemistry, vol.5758, 2002.
DOI : 10.1007/978-94-017-3405-9_4

L. C. Brown and T. O. Barnwell, Enhanced stream water quality models, QUAL2E and QUAL2E UNCAS Documentation and user's TechReport, 1987.

R. Bruno, V. Palumbo, and S. Bonduà, Identication of regional variability component by geostatistical analysis of stream sediments. In : geoEnv III -Geostatistics for Environmental Applications, p.113123, 2001.

M. Butts, J. Payne, M. Kristensen, and H. Madsen, An evaluation of the impact of model structure on hydrological modelling uncertainty for streamow simulation, Journal of Hydrology, vol.298, p.242266, 2004.

V. Casper, Validation of a large scale hydrological model with data elds retrieved from reective and thermal optical remote sensing data -a case study for the upper rhine valley, Physics and Chemistry of the Earth, vol.33, 2008.

P. Chauvet, Eléments d'analyse structurale des fai-k à 1 dimension, Thèse de Doctorat, 1987.
DOI : 10.1007/978-94-015-6844-9_9

J. Chilès, S. Séguret, and P. Riboud, Geostatistical analysis of validation data of an air pollution simulator, Proceedings of the Eighth International Geostatistics Congress 2, 2008.

J. Chilès and P. Delner, Geostatistics : modeling spatial uncertainty, 1999.
DOI : 10.1002/9781118136188

R. Crabtree, R. Gent, and I. Cliorde, Controlling pollution from combined sewer overows : Practical experience of applying an integrated approach in the UK. Genie-Urbain-Genie Rural 5, p.269272, 1994.

A. Dong, Estimation géostatistique des phénomnènes régis par des équations aux dérivées partielles, Thèse de Doctorat, 1990.

B. Ebel and K. Loague, Physics-based hydrologic-response simulation: Seeing through the fog of equifinality, Hydrological Processes, vol.34, issue.13, p.28872900, 2006.
DOI : 10.1002/hyp.6388

X. Emery, Géostatistique avancée, 2001.

X. Emery, Géostatistique linéaire, 2001.

S. Even, Modélisation d'un écosystème uvial : la Seine -le modèle ProSe, Thèse de Doctorat, 1995.

S. Even, J. Mouchel, P. Servais, N. Flipo, M. Poulin et al., Modeling the impacts of Combined Sewer Overows on the river Seine water quality, Sci Total Environ, vol.375, pp.1-3, 2007.

S. Even, J. Mouchel, P. Servais, L. Hir, P. Thouvenin et al., Suspended Matter and Ecological Behaviour of Rivers and Estuaries. Conceptual and Numerical Modelling, Verh. Intern. Verein. Limnol, vol.27, p.238241, 2000.

S. Even, M. Poulin, J. Garnier, G. Billen, P. Servais et al., River ecosystem modelling: Application of the PROSE model to the Seine river (France), Hydrobiologia, vol.373, p.2737, 1998.
DOI : 10.1007/978-94-011-5266-2_3

S. Even, M. Poulin, J. Mouchel, M. Seidl, and P. Servais, Modelling oxygen decits in the Seine river downstream of combined sewer overows, Ecol. Model, vol.173, p.177196, 2004.

H. Fischer and M. Pusch, Comparison of bacterial production in sediments, epiphyton and the pelagic zone of a lowland river, Freshwater Biology, vol.151, issue.10, 2001.
DOI : 10.1023/A:1003520907962

N. Flipo, Modélisation intégrée des transferts d'azote dans les aquifères et les rivières : Application au bassin du Grand Morin, Thèse de Doctorat, 2005.

N. Flipo, S. Even, M. Poulin, S. Théry, and E. Ledoux, Modelling nitrate uxes at the catchment scale using the integrated tool CaWaQS, Sci Total Environ, vol.375, p.6979, 2007.

N. Flipo, S. Even, M. Poulin, M. Tusseau-vuillemin, T. Améziane et al., Biogeochemical modelling at the river scale : Plankton and periphyton dynamics -Grand Morin case study, France. Ecol. Model, vol.176, p.333347, 2004.

N. Flipo, N. Jeannée, M. Poulin, S. Even, and E. Ledoux, Assessment of nitrate pollution in the Grand Morin aquifers (France): Combined use of geostatistics and physically based modeling, Environmental Pollution, vol.146, issue.1, p.241256, 2007.
DOI : 10.1016/j.envpol.2006.03.056

URL : https://hal.archives-ouvertes.fr/hal-00578265

N. Flipo, C. Rabouille, M. Poulin, S. Even, M. Tusseau-vuillemin et al., Primary production in headwater streams of the Seine basin: The Grand Morin river case study, Science of The Total Environment, vol.375, issue.1-3, p.98109, 2007.
DOI : 10.1016/j.scitotenv.2006.12.015

URL : https://hal.archives-ouvertes.fr/hal-00586325

C. De-fouquet, D. Gallois, and G. Perron, Geostatistical characterization of nitrogen dioxide concentration in an urban area -part ii : Time component of the estimation error, Atmospheric Environment, vol.41, p.66916700, 2007.
URL : https://hal.archives-ouvertes.fr/hal-00579944

C. De-fouquet, L. Malherbe, and A. Ung, Geostatistical analysis of the temporal variability of ozone concentrations. Comparison between CHIMERE model output and surface observations, 2010.
URL : https://hal.archives-ouvertes.fr/hal-00878480

J. Garnier and G. Billen, Production vs. Respiration in river systems: An indicator of an ???ecological status???, Science of The Total Environment, vol.375, issue.1-3, p.124, 2007.
DOI : 10.1016/j.scitotenv.2006.12.006

J. Garnier, G. Billen, and M. Coste, Seasonal succession of diatoms and chlorophycae in the drainage network of the river Seine : Observations and modelling, Limnol. Oceanogr, vol.40, issue.4, p.750765, 1995.

J. Garnier, G. Billen, E. Hannon, S. Fonbonne, Y. Videnina et al., Modeling transfer and retention of nutrients in the drainage network of the danube river, Estuar. Coast. Shelf, vol.54, 2002.

J. Garnier, G. Billen, P. Hanset, P. Testard, and M. Coste, Développement algual et eutrophisation dans le réseau hydrographique de la Seine La Seine en son bassin-Fonctionnement écologique d'un système uvial anthropisé, p.593626, 1998.

J. Garnier, G. Billen, N. Sanchez, and B. Leporcq, Ecological functioning of the Marne reservoir (upper Seine basin, France) Regul. Rivers : Res, p.5171, 2000.

J. Garnier, J. Némery, G. Billen, and S. Théry, Nutrient dynamics and control of eutrophication in the Marne River system: modelling the role of exchangeable phosphorus, Journal of Hydrology, vol.304, issue.1-4, p.397412, 2005.
DOI : 10.1016/j.jhydrol.2004.07.040

URL : https://hal.archives-ouvertes.fr/insu-00382118

A. Güntner, S. Uhlenbrook, J. Seibert, and C. Leibundgut, Multi-criterial validation of TOP- MODEL in a mountainous catchment, Hydrological Processes 13, 1999.

J. Ifremer, Site internet de l'ifremer, 2009.

A. Journel, Géostatistique Minière -Tome II, 1977.

D. G. Krige, A statistical approach to some basic mine valuation problems on the witwatersrand, Journal of the Chemical, Metallurgical and Mining Society of South Africa, vol.52, issue.6, p.119139, 1951.

C. Lancelot, C. Veth, and S. Mathot, Modelling ice-edge phytoplankton bloom in the scotiaweddell sea sector of the southern ocean during spring 1998, J. mar. System, vol.2, p.333346, 1991.

M. Maldiney, Caractéristiques physiques des particules en suspension dans un euve canalisé, exemple de la Seine, Thèse de Doctorat, École Nationale Supérieure des Ponts et Chaussées, 1994.

A. Maréchal, Elf-Aquitaine (Production) 1983. Kriging seismic data in presence of faults, Geostatistics for Natural Resources Characterization

L. Martin, Fonctionnement écologique de la seine à l'aval de la station d'épuration d'achères : données expérimentales et modélisation bidimensionelle, Thèse de Doctorat, 2001.

G. Matheron, La théorie des variables regionalisées et ses applications Ecole Nationale Supérieure des Mines de Paris, cahiers du centre de morphologie mathématique, fasc, 1970.

L. Mccarter, The multiple identities of vibrio parahaemolyticus, J. Molec. Microbiol. Biotechnol, vol.1, issue.1, p.5157, 1999.

F. Moatar, Modélisations statistiques et déterministes des paramètres physico-chimiques utilisés en surveillance des eaux des rivières : application à la validation des séries de mesures en continu (cas de la loire moyenne), 1997.

F. Moatar, Variabilités spatio-temporelles dans les systèmes uviaux : descripteurs et modèles des couplages hydrologie -biogéochimie et hydraulique -morphologie, 2006.

P. Monestiez, J. Bailly, P. Lagacherie, and M. Voltz, Geostatistical modelling of spatial processes on directed trees: Application to fluvisol extent, Geoderma, vol.128, issue.3-4, p.179191, 2005.
DOI : 10.1016/j.geoderma.2005.04.002

J. Nash and J. Sutclie, River ow forecasting through conceptual models. Part I, a discussion of principles, Journal of Hydrology, vol.10, 1970.

E. Polus-lefebvre, C. De-fouquet, C. Bernard-michel, N. Flipo, and M. Poulin, Geostatistical model for concentrations or ow rates in streams : some results, Proceedings of the Eighth International Geostatistics Congress 2, 2008.

M. Poulin, Réalisation de simulations ProSe -Année de référence, 2003.

L. Seine-en-son-bassin, Fonctionnement écologique d'un système uvial anthropisé, Ch. Modèles : des processus au bassin versant, p.679720

M. Poulin, S. Even, and N. Flipo, Modélisation du fonctionnement hydraulique de la marne entre epernay et la ferté sous jouarre, 2000.

M. Poulin, N. Flipo, G. Billen, and J. Garnier, ProSe, problématiques nouvelles et développements attendus, 2009.

I. Prosser and P. Rustomji, Sediment transport capacity relations for overland ow, Progress in Physical Geography, vol.24, issue.2, p.179193, 2000.

L. Quynh, G. Billen, J. Garnier, S. Théry, C. Fezard et al., Nutrient (N, P) budgets for the Red River basin (Vietnam and China), Global Biogeochemical Cycles, vol.57, issue.58, p.2002, 2005.
DOI : 10.1029/2004GB002405

J. Refsgaard, Parameterisation, calibration and validation of distributed hydrological models, Journal of Hydrology, vol.198, issue.1-4, p.6997, 1997.
DOI : 10.1016/S0022-1694(96)03329-X

P. Reichert, aquasim-a tool for simulation and data analysis of aquatic systems, Water Science and Technology, vol.30, issue.2, p.2131, 1994.

P. Reichert, River Water Quality Model no.1 (rwqm1) : Case study II oxygen and nitrogen conversion processes in the river glatt (Switzerland), Water Science and Technology, vol.43, issue.5, p.5160, 2001.

P. Reichert, D. Borchart, M. Henze, W. Rauch, P. Shanahan et al., River Water Quality Model no. 1 : II. biochemical process equations, Water Science and Technology, vol.43, issue.5, p.1130, 2001.

J. Rivoirard, Introduction au krigeage disjonctif et à la géostatistique non linéaire. Cours C-139, 1991.

J. Rivoirard, Concepts et méthodes de la géostatistique. Cours C-158, 1995.

R. Gall, A. Poulin, M. Debroas, D. Flipo, and N. , A physical-microbial food web coupled model to study the evolution of the ecological functioning of a new reservoir after its ooding, Ecological Modelling, vol.220, p.841856, 2009.

J. Sandre, Service d'administration nationale des données et référentiels sur l'eau, 2008.

S. Seitzinger, R. Styles, E. Boyer, R. Alexander, G. Billen et al., Nitrogen retention in rivers: model development and application to watersheds in the northeastern U.S.A., Biogeochemistry, vol.5758, 2002.
DOI : 10.1007/978-94-017-3405-9_6

A. Sferratore, G. Billen, J. Garnier, and S. Théry, Modeling nutrient (N, P, Si) budget in the Seine watershed: Application of the Riverstrahler model using data from local to global scale resolution, Global Biogeochemical Cycles, vol.210, issue.211, pp.4-07, 2005.
DOI : 10.1029/2005GB002496

J. O. Skøien, R. Merz, and G. Blöschl, Top-kriging -geostatistics on stream networks, Hydrology and Earth System Sciences, vol.10, p.277287, 2006.

H. Streeter and E. B. Phelps, A study of the pollution and natural purication of the Ohio River, 1925.

G. Tayfur, Applicability of Sediment Transport Capacity Models for Nonsteady State Erosion from Steep Slopes, Journal of Hydrologic Engineering, vol.7, issue.3, p.252259, 2002.
DOI : 10.1061/(ASCE)1084-0699(2002)7:3(252)

N. Van-breemen, E. Boyer, C. Goodale, N. Jaworski, K. Paustian et al., Where did all the nitrogen go? Fate of nitrogen inputs to large watersheds in the northeastern U.S.A., Biogeochemistry, vol.5758, 2002.
DOI : 10.1007/978-94-017-3405-9_8

P. Vanrolleghem, D. Borchardt, M. Henze, W. Rauch, P. Reichert et al., River Water Quality Model no.1 (rwqm1) : III biochemical submodel selection, Water Science and Technology, vol.43, issue.5, p.3140, 2001.

J. M. Ver-hoef, E. Peterson, and D. Theobald, Spatial statistical models that use ow and stream distance, Environmental and Ecological Statistics, vol.13, issue.4, p.449464, 2006.

S. Wells, Hydrodynamic and water quality river basin modelling using ce-qual version3, 2000.

T. Wool, R. Ambrose, J. Martin, and E. C. , Water Quality Analysis Simulation Program (wasp) version 6.0 -User's manual, 2001.

C. Yang, Sediment transport theory and practice Il a été montré que ces pourcentages sont mieux évalués (par rapport à la référence exhaustive ) s'ils sont calculés par la méthode améliorée consistant en une pondération spatiale, 1996.

R. Bibliographiques, B. C. Et, C. De, and F. , Geostatistical indicators of waterway quality for nutrients, VIIth Congress of Geostatistics, pp.907-912, 2005.

B. G. , J. Garnier, P. Hanset-even-s, M. Poulin, J. Garnier et al., Modelling phytoplankton development in whole drainage networks : the RIVERSTRAHLER model applied to the Seine river system, River ecosystem modeling : application of the PROSE model to the Seine River (France), Hydrobiologia, pp.119137-373, 1994.

E. S. , M. Poulin, J. Mouchel, M. Seidl, and P. Servais, Modelling oxygen decits in the Seine river downstream of combined sewer overows, Ecol. Model, vol.173, pp.177-196, 2004.

F. N. , S. Even, M. Poulin, M. Tusseau-vuillemin, T. Ameziane et al., Bio- geochemical modelling at the river scale : plankton and periphyton dynamics (Grand Morin case study, France), Ecol. Model, vol.176, pp.3-4, 2004.

F. N. , C. Rabouille, M. Poulin, S. Even, M. Tusseau-vuillemin et al., Primary production in headwater streams of the Seine basin : the Grand Morin river case study, Sci. of Total. Environ, vol.375, pp.98-109, 2007.
URL : https://hal.archives-ouvertes.fr/hal-00586325

G. J. , G. Billen, and M. Coste, Seasonal succession of diatoms and chlorophycae in the drainage network of the river Seine : observations and modelling, Limnol. Oceanogr, vol.40, issue.4, p.750765, 1975.

. Mcgraw-hill, Computer models for water quality analysis

R. B. Ambrose, T. A. Wool, J. P. Wool, and R. W. Schanz, wasp4, A hydrodynamic and water quality model. Model theory, user's manual guide and programmer's guide, 1988.

S. Anderton, J. Latron, and F. Gallart, Sensitivity analysis and multi-response, multi-criteria evaluation of a physically based distributed model, Hydrological Processes, vol.35, issue.2, p.333353, 2002.
DOI : 10.1002/hyp.336

S. Anderton, J. Latron, S. White, P. Llorens, F. Gallart et al., Internal evaluation of a physically-based distributed model using data from a Mediterranean mountain catchment, Hydrology and Earth System Sciences, vol.6, issue.1, p.6783, 2002.
DOI : 10.5194/hess-6-67-2002

URL : https://hal.archives-ouvertes.fr/hal-00304650

B. Arheimer and J. Olsson, Integration and coupling of hydrological models with water quality models : Applications in Europe, 2003.

G. Arhonditsis and M. Brett, Evaluation of the current state of mechanistic aquatic biogeochemical modeling, Marine Ecology Progress Series, vol.271, 1326.
DOI : 10.3354/meps271013

R. Bagnold, An Approach to the Sediment Transport Problem from General Physics. Physiographic and Hydraulic Studies of Rivers. Tech. rep., Geological Survey Professional paper 422-I, 1966.

T. Barnwell, L. Brown, and R. Whittemore, Systems Analysis in Water Quality Management, QUAL2E -A Case Study in Water Quality Modelling Software, p.377387, 1987.

K. Beven, Changing ideas in hydrology ??? The case of physically-based models, Journal of Hydrology, vol.105, issue.1-2, p.157172, 1989.
DOI : 10.1016/0022-1694(89)90101-7

K. Beven, Prophecy, reality and uncertainty in distributed hydrological modelling, Advances in Water Resources, vol.16, issue.1, p.4151, 1993.
DOI : 10.1016/0309-1708(93)90028-E

K. Beven, A manifesto for the equinality thesis, Journal of Hydrology, vol.320, 1836.

K. Beven, On undermining science ? Hydrological Processes 20, p.31413146, 2006.

G. Billen, J. Garnier, A. Ficht, and C. Cun, Ecological modeling of the 50 last years of anthropogenic impact in the seine estuary, Estuaries, vol.24, issue.6, p.977993, 2001.

G. Billen, J. Garnier, and P. Hanset, Modelling phytoplankton development in whole drainage networks : The riverstrahler model applied to the Seine river system, Hydrobiologia, vol.289, 1994.

G. Billen, J. Garnier, and M. Meybeck, La Seine en son bassin. Fonctionnement écologique d'un système uvial anthropisé, Ch. Les sels nutritifs : l'ouverture des cycles, p.5315, 1998.

G. Billen, J. Garnier, and V. Rousseau, Nutrient uxes and water quality in the drainage network of the scheldt basin over the last 50 year, Hydrobiologia, vol.540, pp.1-3, 2005.

G. Billen and P. Servais, Modélisation des processus de dégradation bactérienne de la matière organique en milieu aquatique, Micro-organismes dans les écosystèmes océaniques, p.219245, 1989.

G. Billen, P. Servais, and S. Becquevort, Dynamics of bacterioplankton in oligotrophic and eutrophic aquatic environments: bottom-up or top-down control?, Hydrobiologia, vol.51, issue.1, p.3742, 1990.
DOI : 10.1007/BF00041438

B. P. Boudreau, Diagenetic Models and their Implementation, 1997.
DOI : 10.1007/978-3-642-60421-8

L. C. Brown and T. O. Barnwell, Enhanced stream water quality models, QUAL2E and QUAL2E UNCAS Documentation and user's TechReport, 1987.

M. Butts, J. Payne, M. Kristensen, and H. Madsen, An evaluation of the impact of model structure on hydrological modelling uncertainty for streamow simulation, Journal of Hydrology, vol.298, p.242266, 2004.

V. Casper, Validation of a large scale hydrological model with data elds retrieved from reective and thermal optical remote sensing data -a case study for the upper rhine valley, Physics and Chemistry of the Earth, vol.33, 2008.

J. Chilès and P. Delner, Geostatistics : modeling spatial uncertainty, 1999.
DOI : 10.1002/9781118136188

J. Chilès, S. Séguret, and P. Riboud, Geostatistical analysis of validation data of an air pollution simulator, Proceedings of the Eighth International Geostatistics Congress 2, 2008.

R. Crabtree, R. Gent, and I. Cliorde, Controlling pollution from combined sewer overows : Practical experience of applying an integrated approach in the UK. Genie-Urbain-Genie Rural 5, p.269272, 1994.

C. De-fouquet, La modélisation géostatistique des milieux anthropisés, 2006.

B. Ebel and K. Loague, Physics-based hydrologic-response simulation: Seeing through the fog of equifinality, Hydrological Processes, vol.34, issue.13, 2006.
DOI : 10.1002/hyp.6388

S. Even, J. Mouchel, P. Servais, N. Flipo, M. Poulin et al., Modeling the impacts of Combined Sewer Overows on the river Seine water quality, Science of the Total Environment, vol.375, pp.1-3, 2007.

S. Even, M. Poulin, J. Garnier, G. Billen, P. Servais et al., River ecosystem modelling: Application of the PROSE model to the Seine river (France), Hydrobiologia, vol.373, p.2737, 1998.
DOI : 10.1007/978-94-011-5266-2_3

S. Even, M. Poulin, J. Mouchel, M. Seidl, and P. Servais, Modelling oxygen decits in the Seine river downstream of combined sewer overows, Ecological Modelling, vol.173, p.177196, 2004.

H. Fischer and M. Pusch, Comparison of bacterial production in sediments, epiphyton and the pelagic zone of a lowland river, Freshwater Biology, vol.151, issue.10, 2001.
DOI : 10.1023/A:1003520907962

N. Flipo, S. Even, M. Poulin, S. Théry, and E. Ledoux, Modelling nitrate uxes at the catchment scale using the integrated tool CaWaQS, Science of the Total Environment, vol.375, p.6979, 2007.

N. Flipo, S. Even, M. Poulin, M. Tusseau-vuillemin, T. Améziane et al., Biogeochemical modelling at the river scale : Plankton and periphyton dynamics -Grand Morin case study, France, Ecological Modelling, vol.176, issue.333347, 2004.

N. Flipo, N. Jeannée, M. Poulin, S. Even, and E. Ledoux, Assessment of nitrate pollution in the Grand Morin aquifers (France): Combined use of geostatistics and physically based modeling, Environmental Pollution, vol.146, issue.1, p.241256, 2007.
DOI : 10.1016/j.envpol.2006.03.056

URL : https://hal.archives-ouvertes.fr/hal-00578265

N. Flipo, C. Rabouille, M. Poulin, S. Even, M. Tusseau-vuillemin et al., Primary production in headwater streams of the Seine basin: The Grand Morin river case study, Science of The Total Environment, vol.375, issue.1-3, p.98109, 2007.
DOI : 10.1016/j.scitotenv.2006.12.015

URL : https://hal.archives-ouvertes.fr/hal-00586325

J. Garnier, G. Billen, and M. Coste, Seasonal succession of diatoms and chlorophycae in the drainage network of the river Seine : Observations and modelling, Limnology and Oceanography, vol.40, issue.4, p.750765, 1995.

J. Garnier, G. Billen, E. Hannon, S. Fonbonne, Y. Videnina et al., Modeling transfer and retention of nutrients in the drainage network of the danube river, Estuarine, Coastal and Shelf Science, vol.54, 2002.

J. Garnier, G. Billen, P. Hanset, P. Testard, and M. Coste, Développement algual et eutrophisation dans le réseau hydrographique de la Seine La Seine en son bassin-Fonctionnement écologique d'un système uvial anthropisé, p.593626, 1998.

J. Garnier, G. Billen, N. Sanchez, and B. Leporcq, Ecological functioning of the Marne reservoir (upper Seine basin, France) Regulated Rivers : Research Management, p.5171, 2000.

J. Garnier, J. Némery, G. Billen, and S. Théry, Nutrient dynamics and control of eutrophication in the Marne River system: modelling the role of exchangeable phosphorus, Journal of Hydrology, vol.304, issue.1-4, p.397412, 2005.
DOI : 10.1016/j.jhydrol.2004.07.040

URL : https://hal.archives-ouvertes.fr/insu-00382118

A. Güntner, S. Uhlenbrook, J. Seibert, and C. Leibundgut, Multi-criterial validation of TOP- MODEL in a mountainous catchment, Hydrological Processes 13, 1999.

C. Lancelot, C. Veth, and S. Mathot, Modelling ice-edge phytoplankton bloom in the scotiaweddell sea sector of the southern ocean during spring 1998, Journal of Marine Systems, vol.2, p.333346, 1991.

M. Maldiney, Caractéristiques physiques des particules en suspension dans un euve canalisé, exemple de la Seine, 1994.

L. Mccarter, The multiple identities of vibrio parahaemolyticus, Journal of Molecular Microbiology Biotechnology, vol.1, issue.1, p.5157, 1999.

J. Nash and J. Sutclie, River ow forecasting through conceptual models. Part I, a discussion of principles, Journal of Hydrology, vol.10, 1970.

E. Polus-lefebvre, C. De-fouquet, C. Bernard-michel, N. Flipo, and M. Poulin, Geostatistical model for concentrations or ow rates in streams : some results, Proceedings of the Eighth International Geostatistics Congress 2, 2008.

M. Poulin, Réalisation de simulations ProSe -Année de référence, 2003.

I. Prosser and P. Rustomji, Sediment transport capacity relations for overland ow, Progress in Physical Geography, vol.24, issue.2, p.179193, 2000.

L. Quynh, G. Billen, J. Garnier, S. Théry, C. Fezard et al., Nutrient (N, P) budgets for the Red River basin (Vietnam and China), Global Biogeochemical Cycles, vol.57, issue.58, p.2002, 2005.
DOI : 10.1029/2004GB002405

J. Refsgaard, Parameterisation, calibration and validation of distributed hydrological models, Journal of Hydrology, vol.198, issue.1-4, p.6997, 1997.
DOI : 10.1016/S0022-1694(96)03329-X

P. Reichert, aquasim-a tool for simulation and data analysis of aquatic systems, Water Science and Technology, vol.30, issue.2, p.2131, 1994.

P. Reichert, D. Borchart, M. Henze, W. Rauch, P. Shanahan et al., River Water Quality Model no. 1 : II. biochemical process equations, Water Science and Technology, vol.43, issue.5, p.1130, 2001.

A. Sferratore, G. Billen, J. Garnier, and S. Théry, Modeling nutrient (N, P, Si) budget in the Seine watershed: Application of the Riverstrahler model using data from local to global scale resolution, Global Biogeochemical Cycles, vol.210, issue.211, pp.4-07, 2005.
DOI : 10.1029/2005GB002496

H. Streeter and E. B. Phelps, A study of the pollution and natural purication of the Ohio River, 1925.

G. Tayfur, Applicability of Sediment Transport Capacity Models for Nonsteady State Erosion from Steep Slopes, Journal of Hydrologic Engineering, vol.7, issue.3, p.252259, 2002.
DOI : 10.1061/(ASCE)1084-0699(2002)7:3(252)

S. Wells, Hydrodynamic and water quality river basin modelling using ce-qual version3, 2000.

T. Wool, R. Ambrose, J. Martin, and E. C. , Water Quality Analysis Simulation Program (wasp) version 6.0 -User's manual, 2001.

C. Yang, Sediment transport theory and practice, 1996.