G. Abbas, M. Saqib, J. Akhtar, G. Murtaza, M. Shahid et al., Relationship between rhizosphere acidification and phytoremediation in two acacia species, Journal of Soils and Sediments, vol.16, pp.1392-1399, 2016.
DOI : 10.1007/s11368-014-1051-9

V. Acosta-martínez, L. Cruz, D. Sotomayor-ramírez, and L. Pérez-alegría, Enzyme activities as affected by soil properties and land use in a tropical watershed, Applied Soil Ecology, 2007.

D. Ahmann, L. R. Krumholz, H. F. Hemond, D. R. Lovley, and F. M. Morel, Microbial mobilization of arsenic from sediments of the Aberjona watershed, Environmental Science and Technology, vol.31, 1997.

B. Alloway, Heavy Metals in Soils:Trace Metals and Metalloids in Soils and Their Bioavailability, Environmental Pollution, 2012.

B. J. Alloway, Heavy Metals in Soils, Environmental Pollution, 2013.

D. Amouroux, J. C. Wasserman, E. Tessier, and O. F. Donard, Elemental mercury in the atmosphere of a tropical Amazonian forest, Environmental Science and Technology, 1999.
URL : https://hal.archives-ouvertes.fr/hal-01590102

A. Anderson, The Biochemistry of Mercury in the Environment, in: Mercury in Soils, pp.79-112, 1979.

J. P. Anderson, Methods of Soil Analysis. Part 2. Chemical and Microbiological Properties, pp.831-871, 1982.

J. P. Anderson and K. H. Domsch, A physiological method for the quantitative measurement of microbial biomass in soils, Soil Biology and Biochemistry, vol.10, pp.90099-90107, 1978.

A. Andersson, The Biogeochemistry of mercury in the environment, pp.79-112, 1979.

D. A. Angers, A. Pesant, and J. Vigneux, Early Cropping-Induced Changes in Soil Aggregation, Organic Matter, and Microbial Biomass, Soil Science Society of America Journal, vol.56, p.115, 1992.

G. T. Ankley, D. M. Di-toro, D. J. Hansen, and W. J. Berry, Assessing the ecological risk of metals in sediments, Environmental Toxicology and Chemistry, vol.15, pp.2053-2055, 1996.

D. Arenas-lago, M. L. Andrade, M. Lago-vila, A. Rodríguez-seijo, and F. A. Vega, Sequential extraction of heavy metals in soils from a copper mine: Distribution in geochemical fractions, Geoderma, vol.230, issue.231, pp.108-118, 2014.

M. R. Asgharipour and M. Rafiei, The effects of land use on biomass and catabolic diversity of soil 211 microbial communities, 2015.

F. Asmar, Variation in activity of root extracellular phytase between genotypes of barley, Plant and Soil, vol.195, pp.61-64, 1997.

N. N. Badiane, J. L. Chotte, E. Pate, D. Masse, and C. Rouland, Use of soil enzyme activities to monitor soil quality in natural and improved fallows in semi-arid tropical regions, Applied Soil Ecology, vol.18, pp.229-238, 2001.

W. Baeyens, F. Monteny, M. Leermakers, and S. Bouillon, Evalution of sequential extractions on dry and wet sediments, Analytical and Bioanalytical Chemistry, vol.376, pp.890-901, 2003.
DOI : 10.1007/s00216-003-2005-z

M. Bahn, I. A. Janssens, M. Reichstein, P. Smith, and S. E. Trumbore, Soil respiration across scales: towards an integration of patterns and processes, New Phytologist, vol.186, pp.292-296, 2010.
DOI : 10.1111/j.1469-8137.2010.03237.x

C. Balland-bolou-bi, E. B. Bolou-bi, V. Alphonse, S. Giusti-miller, M. D. Jusselme et al., Impact of microbial activity on the mobility of metallic elements (Fe, Al and Hg) in tropical soils, Geoderma, vol.334, pp.146-154, 2019.
URL : https://hal.archives-ouvertes.fr/hal-01857320

C. Balland-bolou-bi, B. Turc, V. Alphonse, and N. Bousserrhine, Impact of microbial communities from tropical soils on the mobilization of trace metals during dissolution of cinnabar ore, Journal of Environmental Sciences (China), vol.56, pp.122-130, 2017.
URL : https://hal.archives-ouvertes.fr/hal-01671202

R. I. Barnhisel and J. M. Hower, Coal surface mine reclamation in the eastern United States : the lllllllllrevegetation of disturbed lands to hayland/pasture or cropland, Advances in Agronomy, vol.61, pp.233-275, 1997.

J. Barret, Illustrated Atlas of French Guyana, 2004.

P. K. Basavaraja, S. D. Sharma, B. N. Dhananjaya, and M. S. Badrinath, Acacia nilotica : A tree species for amelioration of sodic soils in Central dry zone of Karnataka , India. 19th World Congress of Soil Science, Soil Solutions for a Changing World, pp.73-76, 2010.

W. R. Bastos, J. P. Gomes, R. C. Oliveira, R. Almeida, E. L. Nascimento et al., Mercury in the environment and riverside population in the Madeira River Basin, Amazon, Brazil, Science of the Total Environment, vol.368, pp.344-351, 2006.

F. Baty, M. Facompré, J. Wiegand, J. Schwager, and M. H. Brutsche, Analysis with respect to instrumental variables for the exploration of microarray data structures, BMC Bioinformatics, vol.7, 2006.

J. M. Benoit, C. C. Gilmour, and R. P. Mason, Aspects of bioavailability of mercury for methylation in pure cultures of Desulfobulbus propionicus (1pr3), Applied and Environmental Microbiology, 2001.

S. Bissegger, M. Rodriguez, J. Brisson, and K. P. Weber, Catabolic profiles of microbial communities in relation to plant identity and diversity in free-floating plant treatment wetland mesocosms, Ecological Engineering, 2014.

C. Blodau, A review of acidity generation and consumption in acidic coal mine lakes and their watersheds, Science of the Total Environment, 2006.

J. Bloem, T. Schouten, S. Sørensen, and A. M. Breure, Application of microbial indicators in ecological approaches to monitor soil quality, 2003.

A. Borowik and J. Wyszkowska, Soil moisture as a factor affecting the microbiological and biochemical activity of soil, Plant, Soil and Environment, vol.62, pp.250-255, 2016.

B. C. Bostick and S. Fendorf, Arsenite sorption on troilite (FeS) and pyrite (FeS2), Geochimica et Cosmochimica Acta, vol.67, pp.909-921, 2003.

H. Bothe, Biology of the nitrogen cycle, 2007.

A. Boudou, Y. Dominique, S. Cordier, and N. Frery, Les chercheurs d'or et la pollution par le mercure en Guyane française, Conséquences environnementales et sanitaires. Environnement, Risques et Sante, 2006.

N. Bousserrhine, Etude de paramètres de la réduction bactérienne du fer et application à la déferrification de minéraux industriels, 1995.

N. Bousserrhine, U. Gasser, E. Jeanroy, and J. Berthelin, Effect of aluminium substitution on ferrireducing bacterial activity and dissolution of goethites, Comptes Rendus de l'Academie de Sciences -Serie IIa: Sciences de La Terre et Des Planetes, vol.326, pp.80252-80260, 1998.

N. Bousserrhine, U. G. Gasser, E. Jeanroy, and J. Berthelin, Bacterial and chemical reductive dissolution of Mn-, Co-, Cr-, and Al-substituted goethites, Geomicrobiology Journal, vol.16, pp.245-258, 1999.

H. B. Bradl, Adsorption of heavy metal ions on soils and soils constituents, Journal of Colloid and Interface Science, 2004.

A. Bradshaw, Restoration of mined lands-using natural processes, Ecological Engineering, vol.8, pp.255-269, 1997.
DOI : 10.1016/s0925-8574(97)00022-0

A. D. Bradshaw, the Reconstruction of Ecosystems, Journal of Applied Ecology, vol.20, pp.1-17, 1983.

K. Broos, J. Mertens, and E. Smolders, Toxicity of heavy metals in soil assessed with various soil microbial and plant growth assays: a comparative study, Environmental Toxicology and Chemistry, vol.24, pp.634-674, 2005.

R. P. Butterfield, Early species selection for tropical reforestation: a consideration of stability, Forest Ecology and Management, vol.81, pp.161-168, 1996.

C. ,

C. D. Campbell, S. J. Chapman, C. M. Cameron, M. S. Davidson, and J. M. Potts, A Rapid Microtiter Plate Method To Measure Carbon Dioxide Evolved from Carbon Substrate Amendments so as To Determine the Physiological Profiles of Soil Microbial Communities by Using Whole Soil A Rapid Microtiter Plate Method To Measure Carbon Dioxide Ev, Applied and Environmental Microbiology, vol.69, pp.3593-3599, 2003.

C. Cao, D. Jiang, X. Teng, Y. Jiang, W. Liang et al., Soil chemical and microbiological properties along a chronosequence of Caragana microphylla Lam. plantations in the Horqin sandy land of Northeast China, Applied Soil Ecology, vol.40, pp.78-85, 2008.

F. Caravaca, T. Hernández, C. Garc??a, and A. Roldán, Improvement of rhizosphere aggregate stability of afforested semiarid plant species subjected to mycorrhizal inoculation and compost addition, Geoderma, vol.108, pp.133-144, 2002.

B. J. Cardinale, D. S. Srivastava, E. Duffy, J. Wright, J. P. Downing et al., Effects of biodiversity on the functioning of trophic groups and ecosystems, Nature, vol.443, pp.989-992, 2006.

J. Carmouze, M. Lucotte, and A. Boudou, Le mercure en Amazonie. IRD Éditions, 2001.

A. Carpi, The Toxicology of Mercure, 2001.

B. Cerqueira, F. A. Vega, C. Serra, L. F. Silva, and M. L. Andrade, Time of flight secondary ion mass spectrometry and high-resolution transmission electron microscopy/energy dispersive spectroscopy: A preliminary study of the distribution of Cu 2+ and Cu 2+/Pb 2+ on a Bt horizon surfaces, Journal of Hazardous Materials, vol.195, pp.422-431, 2011.

L. Cécillon, Quels indicateurs pour évaluer la qualité de sols forestiers soumis à des contraintes iiiiiiiiienvironnementales fortes ? Thèse de l, vol.215, 2008.

N. Chacon, W. L. Silver, E. A. Dubinsky, and D. F. Cusack, Iron Reduction and Soil Phosphorus Solubilization in Humid Tropical Forests Soils: The Roles of Labile Carbon Pools and an Electron Shuttle Compound, Biogeochemistry, vol.78, pp.67-84, 2006.

G. M. Chaer, A. S. Resende, E. F. Campello, S. M. De-faria, R. M. Boddey et al., Nitrogen-fixing legume tree species for the reclamation of severely degraded lands in Brazil, Tree Physiology, 2011.

F. S. Chapin, P. M. Vitousek, and K. Van-cleve, The Nature of Nutrient Limitation in Plant Communities, The American Naturalist, 1986.

R. Chaussod, La qualité biologique des sols : Évaluation et implications, Etude et Gestion Des Sols, vol.3, pp.261-278, 1996.

R. L. Chazdon, Beyond deforestation: restoring forests and ecosystem services on degraded lands, Science, vol.320, pp.1458-60, 2008.

M. Chodak and M. Nikli?ska, Effect of texture and tree species on microbial properties of mine soils, Applied Soil Ecology, vol.46, pp.268-275, 2010.

M. Chodak, M. Pietrzykowski, and M. Nikli?ska, Development of microbial properties in a chronosequence of sandy mine soils, Applied Soil Ecology, vol.41, pp.259-268, 2009.

S. C. Choi, T. Chase, and R. Bartha, Metabolic pathways leading to mercury methylation in Desulfovibrio desulfuricans LS, Applied and Environmental Microbiology, 1994.

S. R. Claff, E. D. Burton, L. A. Sullivan, and R. T. Bush, Effect of sample pretreatment on the fractionation of Fe, Cr, Ni, Cu, Mn, and Zn in acid sulfate soil materials, Geoderma, vol.159, pp.156-164, 2010.

T. W. Clarkson, Mercury: Major Issues in Environmental Health, Environmental Health Perspectives, 1992.

T. W. Clarkson and L. Magos, The toxicology of mercury and its chemical compounds, Critical Reviews in Toxicology, 2006.

M. L. Coleman, D. B. Hedrick, D. R. Lovley, D. C. White, and K. Pye, Reduction of Fe(III) in sediments by sulphate-reducing bacteria, Nature, 1993.

E. Colleran, S. Finnegan, and P. Lens, Anaerobic treatment of sulfate-containing waste streams, Antonie Van Leeuwenhoek International Journal of General and Molecular Microbiology, 1995.

G. C. Compeau and R. Bartha, Sulfate-reducing bacteria: principal methylators of mercury in anoxic estuarine sediment, Applied and Environmental Microbiology, vol.50, pp.498-502, 1985.

F. J. Cook and V. A. Orchard, Relationships between soil respiration and soil moisture, Soil Biology and Biochemistry, vol.40, pp.1013-1018, 2008.

J. Cooke and M. Johnson, Ecological restoration of land with particular reference to the mining of metals and industrial minerals: A review of theory and practice, Environ. Rev, vol.10, pp.41-71, 2002.

D. C. Cooper, F. F. Picardal, and A. J. Coby, Interactions between microbial iron reduction and metal geochemistry: Effect of redox cycling on transition metal speciation in iron bearing sediments, Environmental Science and Technology, vol.40, pp.1884-1891, 2006.

R. M. Cornell and U. Schwertmann, The iron oxides, 2003.

S. Cornu and B. Clozel, Extractions séquentielles et spéciation des éléments trace métalliques dans les sols naturels : analyse critique, Etudes et Gestion Des Sols, vol.7, pp.179-189, 2000.

E. Couic, M. Grimaldi, V. Alphonse, C. Balland-bolou-bi, A. Livet et al., Mercury behaviour and C, N, and P biogeochemical cycles during ecological restoration processes of old mining sites in French Guiana, Environmental Science: Processes & Impacts, 2018.
URL : https://hal.archives-ouvertes.fr/hal-01813419

E. F. Covelo, J. M. Matías, F. A. Vega, M. J. Reigosa, and M. L. Andrade, A tree regression analysis of factors determining the sorption and retention of heavy metals by soil, Geoderma, vol.147, pp.75-85, 2008.

E. F. Covelo, F. A. Vega, and M. L. Andrade, Competitive sorption and desorption of heavy metals by individual soil components, Journal of Hazardous Materials, vol.140, pp.308-315, 2007.

A. C. Culhane, G. Perrière, and D. G. Higgins, Cross-platform comparison and visualisation of gene expression data using co-inertia analysis, BMC Bioinformatics, 2003.
URL : https://hal.archives-ouvertes.fr/hal-00427398

D. Silva, E. Nahmani, J. Lapied, E. Alphonse, V. Garnier-zarli et al., Toxicity of mercury to the earthworm Pontoscolex corethrurus in a tropical soil of French Guiana, Applied Soil Ecology, vol.104, pp.79-84, 2016.

V. H. Dale and S. C. Beyeler, Challenges in the development and use of ecological indicators, Ecological Indicators, vol.1, pp.3-10, 2001.

E. A. Davidson and I. A. Janssens, Temperature sensitivity of soil carbon decomposition and feedbacks to climate change, Nature, vol.440, pp.165-173, 2006.

A. Davis, N. S. Bloom, and S. S. Que-hee, The environmental geochemistry and bioaccessibility of mercury in soils and sediments: A review, Risk Analysis, 1997.

S. M. De-faria, A. G. Diedhiou, H. C. De-lima, R. D. Ribeiro, A. Galiana et al., Evaluating the nodulation status of leguminous species from the Amazonian forest of Brazil, Journal of Experimental Botany, vol.61, pp.3119-3127, 2010.

B. S. Dear, J. M. Virgona, G. A. Sandral, A. D. Swan, and S. Morris, Changes in soil mineral nitrogen, nitrogen leached, and surface pH under annual and perennial pasture species, Crop and Pasture Science, vol.60, pp.975-986, 2009.

D. Valle, C. M. Santana, G. P. Augusti, R. Egreja-filho, F. B. Windm??ller et al., Speciation and quantification of mercury in Oxisol, Ultisol, and Spodosol from Amazon (Manaus, Brazil), Chemosphere, vol.58, pp.779-792, 2005.

D. Valle, C. M. Santana, G. P. Augusti, R. Egreja-filho, F. B. Windmöller et al., Speciation and quantification of mercury in Oxisol, Ultisol, and Spodosol from Amazon (Manaus, Brazil), Chemosphere, vol.58, pp.779-792, 2005.

J. Dolbec, D. Mergler, C. J. Sousa-passos, S. Sousa-de-morais, and J. Lebel, Methylmercury exposure affects motor performance of a riverine population of the Tapajos river, Brazilian Amazon, International Archives of Occupational and Environmental Health, 2000.

E. Dominati, M. Patterson, and A. Mackay, A framework for classifying and quantifying the natural capital and ecosystem services of soils, Ecological Economics, vol.69, pp.1858-1868, 2010.

J. W. Doran, D. C. Coleman, D. F. Bezdicek, B. A. Stewart, J. W. Doran et al., Defining and Assessing Soil Quality, 1994.

J. W. Doran, M. Safley, C. Pankhurst, B. M. Doube, and V. Gupta, Defining and assessing soil health and sustainable productivity, Biological Indicators of Soil Health, pp.1-28, 1997.

J. W. Doran and M. R. Zeiss, Soil healht and sustainibility: managing the biotic component of soil quality, Applied Soil Ecology, 2000.

E. Le-floc, &. , and J. Aronson, Définition de quelques concepts de base. Natures, Sciences, Sociétés Hors-série, pp.29-35, 1995.

F. Eivazi and M. A. Tabatabai, Short Communication: The role of microbial rhizosphere in enhancing plant growth of Jatropha curcas in soil contaminated mercury, Soil Biology and Biochemistry, vol.22, pp.891-897, 1990.

S. Ekino, M. Susa, T. Ninomiya, K. Imamura, and T. Kitamura, Minamata disease revisited: An update on the acute and chronic manifestations of methyl mercury poisoning, Journal of the Neurological Sciences, 2007.

E. B. Ekstrom, F. M. Morel, and J. M. Benoit, Mercury methylation independent of the acetylcoenzyme a pathway in sulfate-reducing bacteria, Applied and Environmental Microbiology, 2003.

S. Elfstrand, B. Båth, and A. Mårtensson, Influence of various forms of green manure amendment on soil microbial community composition, enzyme activity and nutrient levels in leek, Applied Soil Ecology, vol.36, pp.70-82, 2007.

P. Fadini and W. Jardim, Is the Negro River Basin (Amazon) impacted by naturally occurring mercury?, Science of The Total Environment, vol.275, pp.71-82, 2001.

J. C. Fardeau and A. P. Conesa, Le phosphore, Bonneau et Souchier, Pedologie vol 2. iiiiiiiiConstituants et proprietes du sol. Masson, pp.557-568, 1994.
URL : https://hal.archives-ouvertes.fr/hal-00885137

R. Fernández-martínez, R. Larios, I. Gómez-pinilla, B. Gómez-mancebo, S. López-andrés et al., Mercury accumulation and speciation in plants and soils from abandoned cinnabar mines, Geoderma, vol.253, issue.254, pp.30-38, 2015.

N. Fierer, M. S. Strickland, D. Liptzin, M. A. Bradford, and C. C. Cleveland, Global patterns in belowground communities, Ecology Letters, 2009.

N. Fin?gar, B. Kos, and D. Le?tan, Bioavailability and mobility of Pb after soil treatment with different remediation methods, Plant, Soil and Environment, 2006.

E. J. Fleming, E. E. Mack, P. G. Green, D. C. Nelson, E. J. Kerin et al., Mercury methylation from unexpected sources: Molybdate-inhibited freshwater sediments and an ironreducing bacterium, Applied and Environmental Microbiology, vol.72, pp.2159-2165, 2006.

J. A. Foley, H. Gibbs, S. H. Olson, G. P. Asner, M. H. Costa et al., Amazonia revealed : forest degradation and loss of ecosystem goods and services in the Amazon Basin Amazonia revealed : forest degradation and loss of ecosystem goods and services in the Amazon Basin, Frontiers in Ecology and the Environment, vol.5, pp.25-32, 2007.

S. Fontaine, G. Bardoux, L. Abbadie, and A. Mariotti, Carbon input to soil may decrease soil carbon content, Ecology Letters, vol.7, pp.314-320, 2004.

M. P. Fontes and P. C. Gomes, Simultaneous competitive adsorption of heavy metals by the mineral matrix of tropical soils, Applied Geochemistry, vol.18, pp.188-197, 2003.

A. A. Franco and S. M. De-faria, The contribution of N2-fixing tree legumes to land reclamation and sustainability in the tropics, Soil Biology and Biochemistry, vol.29, issue.96, pp.229-234, 1997.

A. A. Franco, E. F. Campello, L. E. Dias, S. M. De-faria, N. Fréry et al., Revegetation of acidic residues from iiiiiiiiibauxite mining in Porto Trombetas-PA using nodulated and mycorhizal legume trees. To be iiiiiiiiipresented at Ist Latin American symposium on soil reclamation, Environmental Health Perspectives, 1994.

E. Fritsch, A. J. Herbillon, N. R. Do-nascimento, M. Grimaldi, and A. J. Melfi, From Plinthic Acrisols to Plinthosols and Gleysols: Iron and groundwater dynamics in the tertiary sediments of the upper Amazon basin, European Journal of Soil Science, vol.58, pp.989-1006, 2007.
URL : https://hal.archives-ouvertes.fr/hal-00270014

J. Frouz, J. Kal?ík, and V. Velichová, Factors causing spatial heterogeneity in soil properties, plant cover, and soil fauna in a non-reclaimed post-mining site, Ecological Engineering, vol.37, pp.1910-1913, 2011.

G. ,

M. C. Gabriel and D. G. Williamson, Principal biogeochemical factors affecting the speciation and transport of mercury through the terrestrial environment, Environmental Geochemistry and Health, 2004.

A. García-sánchez, A. Murciego, E. Álvarez-ayuso, I. S. Regina, and M. A. Rodríguez-gonzález, Mercury in soils and plants in an abandoned cinnabar mining area (SW Spain), Journal of Hazardous Materials, vol.168, pp.1319-1324, 2009.

K. Gårdfeldt, J. Munthe, D. Strömberg, and O. Lindqvist, A kinetic study on the abiotic methylation of divalent mercury in the aqueous phase, Science of the Total Environment, 2003.

I. Gavilán-garcía, E. Santos-santos, L. R. Tovar-gálvez, A. Gavilán-garcía, S. Suárez et al., Mercury Speciation in Contaminated Soils from Old Mining Activities in Mexico Using a Chemical Selective Extraction Article, 2008.

J. Ghazoul, Z. Burivalova, J. Garcia-ulloa, and L. A. King, Conceptualizing Forest Degradation, Trends in Ecology and Evolution, vol.30, pp.622-632, 2015.

C. Giacometti, M. S. Demyan, L. Cavani, C. Marzadori, C. Ciavatta et al., Chemical and microbiological soil quality indicators and their potential to differentiate fertilization regimes in temperate agroecosystems, Applied Soil Ecology, vol.64, pp.32-48, 2013.

C. Giai and R. E. Boerner, Effects of ecological restoration on microbial activity, microbial functional diversity, and soil organic matter in mixed-oak forests of southern Ohio, USA. Applied Soil Ecology, vol.35, pp.281-290, 2007.

C. C. Gilmour, E. A. Henry, and R. Mitchell, Sulfate stimulation of mercury methylation in freshwater sediments, Environmental Science & Technology, vol.26, pp.2281-2287, 1992.

D. T. Gjerde, D. R. Wiederin, F. G. Smith, and B. M. Mattson, Metal speciation by means of microbore columns with direct-injection nebulization by inductively coupled plasma atomic emission spectroscopy, Journal of Chromatography A, vol.640, issue.93, p.80170, 1993.

J. Gobat, M. Aragno, and W. Matthey, Le Sol Vivant. PPUR, Suisse, vol.571, 2003.

S. Goldberg, Competitive Adsorption of Arsenate and Arsenite on Oxides and Clay Minerals, Soil Science Society of America Journal, vol.66, p.413, 2002.

P. C. Gomes, M. P. Fontes, A. G. Da-silva, S. De, E. Mendonça et al., Selectivity Sequence and Competitive Adsorption of Heavy Metals by Brazilian Soils, Soil Science Society of America Journal, vol.65, p.1115, 2001.

C. Gonçalves, D. I. Fávaro, S. M. De-oliveira, R. Boulet, M. B. Vasconcellos et al., Preliminary study on mercury distribution in soil profiles from Serra do Navio, Amapá, using radiochemical neutron activation analysis, Journal of Radioanalytical and Nuclear Chemistry, 1998.

X. Gong, Y. Liu, Q. Li, X. Wei, X. Guo et al., Sub-tropic degraded red soil restoration: Is soil organic carbon build-up limited by nutrients supply, Forest Ecology and Management, vol.300, pp.77-87, 2013.

S. Gotoh and W. Patrick, Transformation of Manganese in a Waterlogged Soil As Affected By Redox Potential and Ph, Soil Science Society of America Proceedings, vol.36, 1972.

C. Gounou, N. Bousserrhine, G. Varrault, and J. M. Mouchel, Influence of the iron-reducing bacteria on the release of heavy metals in anaerobic river sediment, Water, Air, and Soil Pollution, vol.212, pp.123-129, 2010.
URL : https://hal.archives-ouvertes.fr/bioemco-00456373

J. Grace, Understanding and managing the global carbon cycle, Journal of Ecology, 2004.

P. Grandjean, R. F. White, A. Nielsen, D. Cleary, and E. C. De-oliveira-santos, Methylmercury neurotoxicity in Amazonian children downstream from gold mining, Environmental Health Perspectives, 1999.

S. B. Gray, A. T. Classen, P. Kardol, Z. Yermakov, and R. Michael-mille, Multiple Climate Change Factors Interact to Alter Soil Microbial Community Structure in an Old-Field Ecosystem, Soil Science Society of America Journal, vol.75, p.2217, 2011.

C. Grimaldi, M. Grimaldi, and S. Guedron, Mercury distribution in tropical soil profiles related to origin of mercury and soil processes, Science of the Total Environment, vol.401, pp.121-129, 2008.
URL : https://hal.archives-ouvertes.fr/bioemco-00399988

M. Grimaldi and C. Grimaldi, Sources, stocks et transferts dans les sols et sédiments. Programme de recherche. Le Mercure en Guyane Française. Rapport final, partie I: la région de, 2001.

M. Grimaldi, J. Oszwald, S. Dolédec, P. Hurtado, I. De-souza-miranda et al., Ecosystem services of regulation and support in Amazonian pioneer fronts: searching for landscape drivers, Landscape Ecology, vol.29, pp.311-328, 2014.
URL : https://hal.archives-ouvertes.fr/hal-01112671

R. Gros, Fonctionnement et qualité des sols soumis à des perturbations d'origines iiiiiiiiianthropiques : réponses du sol, de la flore et de la microflore bactérienne, Thèse ADEME iiiiiiiiiUniversité de Savoie, p.242, 2002.

S. Guedron, Impact de l 'exploitation minière en Guyane française sur les flux de mercure vers les écosystèmes aquatiques, 2008.

S. Guedron, S. Grangeon, B. Lanson, and M. Grimaldi, Mercury speciation in a tropical soil association; Consequence of gold mining on Hg distribution in French Guiana, Geoderma, vol.153, pp.331-346, 2009.
URL : https://hal.archives-ouvertes.fr/insu-00424551

S. Guedron, C. Grimaldi, C. Chauvel, L. Spadini, and M. Grimaldi, Weathering versus atmospheric contributions to mercury concentrations in French Guiana soils, Applied Geochemistry, vol.21, pp.2010-2022, 2006.
URL : https://hal.archives-ouvertes.fr/insu-00226421

S. Guédron, C. Grimaldi, C. Chauvel, L. Spadini, and M. Grimaldi, Weathering versus atmospheric contributions to mercury concentrations in French Guiana soils, Applied Geochemistry, vol.21, pp.2010-2022, 2006.

Y. Han, H. M. Kingston, H. M. Boylan, G. M. Rahman, S. Shah et al., Speciation of mercury in soil and sediment by selective solvent and acid extraction, Analytical and Bioanalytical Chemistry, vol.375, pp.428-436, 2003.

O. J. Hao, J. M. Chen, L. Huang, and R. L. Buglass, Sulfate-reducing bacteria, Critical Reviews in Environmental Science and Technology, 1996.

J. Harris-hellal, Etude des interactions entre sols -mercure -composante microbiologique en Guyane française, 2008.

J. Harris-hellal, M. Grimaldi, E. Garnier-zarli, and N. Bousserrhine, Mercury mobilization by chemical and microbial iron oxide reduction in soils of French Guyana, Biogeochemistry, vol.103, pp.223-234, 2011.
URL : https://hal.archives-ouvertes.fr/bioemco-00537841

J. Harris-hellal, T. Vallaeys, E. Garnier-zarli, and N. Bousserrhine, Effects of mercury on soil microbial communities in tropical soils of French Guyana, Applied Soil Ecology, vol.41, pp.59-68, 2009.
URL : https://hal.archives-ouvertes.fr/bioemco-00450721

Z. L. He, X. E. Yang, V. C. Baligar, and D. V. Calvert, Microbiological and Biochemical Indexing Systems for Assessing Quality of Acid Soils, Advances in Agronomy, pp.78003-78009, 2003.

P. Hed?nec, O. Vindu?ková, J. Kukla, J. ?najdr, P. Baldrian et al., Enzyme activity of topsoil layer on reclaimed and unreclaimed post-mining sites Enzyme activity of topsoil layer on reclaimed and unreclaimed post-mining sites, 2017.

R. J. Hobbs and J. A. Harris, Restoration ecology: Repairing the earth's ecosystems in the new millennium, Restoration Ecology, vol.9, pp.239-246, 2001.

M. Holmer and P. Storkholm, Sulphate reduction and sulphur cycling in lake sediments: A review, Freshwater Biology, 2001.

H. Hou, C. Wang, Z. Ding, S. Zhang, Y. Yang et al., Variation in the soil microbial community of reclaimed land over different reclamation periods. Sustainability (Switzerland), 2018.

Z. Y. Hseu, Extractability and bioavailability of zinc over time in three tropical soils incubated with biosolids, Chemosphere, vol.63, pp.762-771, 2006.

C. L. Hsu, S. L. Wang, and Y. M. Tzou, Photocatalytic reduction of Cr(VI) in the presence of NO3-and Cl-electrolytes as influenced by Fe(III), Environmental Science and Technology, vol.41, pp.7907-7914, 2007.

X. F. Hu, Y. Jiang, Y. Shu, X. Hu, L. Liu et al., Effects of mining wastewater discharges on heavy metal pollution and soil enzyme activity of the paddy fields, Journal of Geochemical Exploration, vol.147, pp.139-150, 2014.

Y. F. Hu, J. J. Peng, S. Yuan, X. Y. Shu, S. L. Jiang et al., , p.220

, Influence of ecological restoration on vegetation and soil microbiological properties in Alpine-cold semi-humid desertified land, Ecological Engineering, vol.94, pp.88-94, 2016.

Q. Huang, W. Liang, and P. Cai, Adsorption, desorption and activities of acid phosphatase on various colloidal particles from an Ultisol, Colloids and Surfaces B: Biointerfaces, 2005.

D. Hui and Y. Luo, Evaluation of soil CO2 production and transport in Duke Forest using a processbased modeling approach, Global Biogeochemical Cycles, vol.18, pp.1-10, 2004.

N. R. Hulugalle, Amelioration of a highly degraded tropical alfisol by planting I. Changes in soil physical and chemical properties 1989-91, Land Degradation & Development, vol.3, pp.141-152, 1992.

E. M. Hutton, Selection and breeding of Leucaena for very acid soils. Leucaena Research in the Asian-Pacific Region, 1983.

. Iedom, , 2017.

F. S. Islam, A. G. Gault, C. Boothman, D. A. Polya, J. M. Charnock et al., Role of metal-reducing bacteria in arsenic release from Bengal delta sediments, Nature, vol.430, pp.68-71, 2004.

M. L. Jackson and P. Barak, Soil chemical analysis : advanced course : a manual of methods useful for instruction and research in soil chemistry, physical chemistry of soils, soil fertility, and soil genesis, 2005.

T. Jaffré, S. Mccoy, F. Rigault, and G. Dagostini, Quelle méthode de végétalisation pour la réhabilitation des anciens sites miniers de Nouvelle-Calédonie, Ecologie Des Milieux Sur Roches Ultramafiques et Sur Sols Métallifères : Actes de La Deuxième Conférence Internationale Sur l'écologie Des Milieux Serpentiniques, pp.285-288, 1997.

M. M. Jager, S. J. Richardson, P. J. Bellingham, M. J. Clearwater, and D. C. Laughlin, Soil fertility induces coordinated responses of multiple independent functional traits, Journal of Ecology, vol.103, pp.374-385, 2015.

R. Jaquetti, J. Gonçalves, J. Ferraz, M. Ferreira, and U. Santos-junior, Ecofunctional Traits and Biomass Production in Leguminous Tree Species under Fertilization Treatments during Forest Restoration in Amazonia, vol.7, p.76, 2016.

X. Jia, . Hong, Y. Li, B. Wu, Y. Zhou et al., Effects of plant restoration on soil microbial biomass in an arid desert in northern China, Journal of Arid Environments, vol.144, pp.192-200, 2017.

M. Jiang, Water stress-induced abscisic acid accumulation triggers the increased generation of reactive oxygen species and up-regulates the activities of antioxidant enzymes in maize leaves, Journal of Experimental Botany, vol.53, pp.2401-2410, 2002.

S. G. Johnston, E. D. Burton, A. F. Keene, B. Planer-friedrich, A. Voegelin et al., Arsenic mobilization and iron transformations during sulfidization of As(V)-bearing jarosite, Chemical Geology, vol.334, pp.9-24, 2012.

D. Jordan, R. J. Kremer, W. A. Bergfield, K. Y. Kim, and V. N. Cacnio, Evaluation of microbial methods as potential indicators of soil quality in historical agricultural fields, Biology and Fertility of Soils, vol.19, pp.297-302, 1995.

E. Kandeler and H. Gerber, Short-term assay of soil urease activity using colorimetric determination of ammonium, Biology and Fertility of Soils, vol.6, pp.68-72, 1988.

F. Kandeler, C. Kampichler, and O. Horak, Influence of heavy metals on the functional diversity of soil microbial communities, Biology and Fertility of Soils, vol.23, pp.299-306, 1996.

H. Kang and C. Freeman, Interactions of Marsh Orchid (Dactylorhiza spp.) and Soil Microorganisms in Relation to Extracellular Enzyme Activities in a Peat Soil, Pedosphere, vol.17, pp.681-687, 2007.

J. Kanowski, C. P. Cattarell, K. Freebody, .. N. Freeman, and D. Harrison, Monitoring revegetation projects in rainforest landscapes, 2010.

D. Karlen, S. Andrews, B. J. Wienhold, and T. Zobeck, Soil Quality Assessment: Past, Present and Future, Electronic Journal of Integrative Biosciences, vol.6, pp.3-14, 2008.

D. L. Karlen, M. J. Mausbach, J. W. Doran, R. G. Cline, R. F. Harris et al., Soil Quality: A Concept, Definition, and Framework for Evaluation (A Guest Editorial), Soil Science Society of America Journal, vol.61, p.4, 1997.

B. Kaur, S. R. Gupta, and G. Singh, Carbon storage and nitrogen cycling in silvopastoral systems on a sodic soil in northwestern India, Agroforestry Systems, vol.54, pp.21-29, 2002.

R. J. Keenan, G. A. Reams, F. Achard, J. V. De-freitas, A. Grainger et al., Dynamics of global forest area: Results from the FAO Global Forest Resources Assessment, Forest Ecology and Management, 2015.

J. J. Kelly, M. Häggblom, and R. L. Tate, Changes in soil microbial communities over time resulting from one time application of zinc: A laboratory microcosm study, Soil Biology and Biochemistry, 1999.

S. Khan, Q. Cao, A. E. Hesham, Y. Xia, J. He et al., Soil enzymatic activities and microbial community structure with different application rates of Cd and Pb, Journal of Environmental Sciences, vol.19, pp.60139-60148, 2007.

A. R. Khwaja, P. R. Bloom, and P. L. Brezonik, Binding constants of divalent mercury (Hg2+) in soil humic acids and soil organic matter, Environmental Science & Technology, vol.40, pp.844-853, 2006.

D. J. Kim, D. I. Lee, and J. Keller, Effect of temperature and free ammonia on nitrification and nitrite accumulation in landfill leachate and analysis of its nitrifying bacterial community by FISH, Bioresource Technology, vol.97, pp.459-468, 2006.

S. Y. Kim, S. H. Lee, C. Freeman, N. Fenner, and H. Kang, Comparative analysis of soil microbial communities and their responses to the short-term drought in bog, fen, and riparian wetlands, Soil Biology and Biochemistry, vol.40, pp.2874-2880, 2008.

J. K. King, S. M. Harmon, T. T. Fu, and J. B. Gladden, Mercury removal, methylmercury formation, and sulfate-reducing bacteria profiles in wetland mesocosms, Chemosphere, vol.46, pp.859-870, 2002.

J. K. King, J. E. Kostka, M. E. Frischer, and F. M. Saunders, Sulfate-reducing bacteria methylate mercury at variable rates in pure culture and in marine sediments, Applied and Environmental Microbiology, 2000.

D. A. Klein, T. C. Loh, and R. L. Goulding, A rapid procedure to evaluate the dehydrogenase activity of soils low in organic matter, Soil Biology and Biochemistry, vol.3, pp.90049-90055, 1971.

J. D. Knoepp, D. C. Coleman, D. A. Crossley, and J. S. Clark, Biological indices of soil quality: An ecosystem case study of their use, Forest Ecology and Management, vol.138, pp.357-368, 2000.

M. Koschorreck, Microbial sulphate reduction at a low pH, FEMS Microbiology Ecology, 2008.

V. N. Kudeyarov and D. S. Jenkinson, The effects of biocidal treatments on metabolism in soil-VI. Fumigation with carbon disulphide, Soil Biology and Biochemistry, issue.76, pp.90036-90041, 1976.

S. Kumar, S. Chaudhuri, and S. K. Maiti, Soil Dehydrogenase Enzyme Activity in Natural and Mine Soil -A Review, Middle-East Journal of Scientific Research, vol.13, pp.898-906, 2013.

R. G. Kuperman and M. M. Carreiro, Soil heavy metal concentrations, microbial biomass and enzyme activities in a contaminated grassland ecosystem, Soil Biology and Biochemistry, vol.29, pp.179-190, 1997.

L. Lacerda and . De, Updating global Hg emissions from small-scale gold mining and assessing its environmental impacts, Environmental Geology, vol.43, pp.308-314, 2002.

L. D. Lacerda, M. De-souza, and M. G. Ribeiro, The effects of land use change on mercury distribution in soils of Alta Floresta, Southern Amazon, Environmental Pollution, vol.129, pp.247-255, 2004.

D. Lamb and P. Lawrence, Mixed species plantations using high value rainforest trees in Australia. Restoration of Tropical Forest Ecosystems, vol.30, pp.101-108, 1993.

W. J. Landesman and J. Dighton, Response of soil microbial communities and the production of plant-available nitrogen to a two-year rainfall manipulation in the New Jersey Pinelands, Soil Biology and Biochemistry, vol.42, pp.1751-1758, 2010.

W. F. Laurance, A. K. Albernaz, P. M. Fearnside, H. L. Vasconcelos, and L. V. Ferreira, Deforestation in Amazonia, Science, vol.304, pp.1109-1120, 2004.

L. Charlet and A. Boudou, Cet OR qui file un mauvais mercure | larecherche.fr. La Recherche, Rubrique "Savoirs, vol.359, pp.52-59, 2002.

C. Le-roux, La réhabilitation des mines et carrières à ciel ouvert : Restauration des sites miniers, Bois et Forêts Des Tropiques, vol.272, pp.5-19, 2002.

M. Ledin, Accumulation of metals by microorganisms -processes and importance for soil systems, Earth Science Reviews, vol.51, pp.1-31, 2000.

M. Leermakers, W. Baeyens, P. Quevauviller, and M. Horvat, Mercury in environmental samples: Speciation, artifacts and validation, TrAC -Trends in Analytical Chemistry, 2005.

A. E. Lewis, Review of metal sulphide precipitation, Hydrometallurgy, vol.104, pp.222-234, 2010.

S. L. Lewis, J. Lloyd, S. Sitch, E. T. Mitchard, and W. F. Laurance, Changing Ecology of Tropical Forests: Evidence and Drivers, Evolution, and Systematics, vol.40, pp.529-549, 2009.

H. Li, F. Zhang, Z. Rengel, and J. Shen, Rhizosphere properties in monocropping and intercropping systems between faba bean (Vicia faba L.) and maize (Zea mays L.) grown in a calcareous soil, Crop and Pasture Science, vol.64, pp.976-984, 2013.

J. Li, X. Zhou, J. Yan, H. Li, and J. He, Effects of regenerating vegetation on soil enzyme activity and microbial structure in reclaimed soils on a surface coal mine site, Applied Soil Ecology, 2015.

Y. Lin, T. Larssen, R. D. Vogt, and X. Feng, Identification of fractions of mercury in water, soil and sediment from a typical Hg mining area in Wanshan, Guizhou province, China. Applied Geochemistry, 2010.

T. Liu, H. Liu, Y. Hu, L. Zhou, and B. Zheng, Growth characteristics of thermophile sulfatereducing bacteria and its effect on carbon steel, Materials and Corrosion, vol.60, pp.218-224, 2009.

S. D. Logsdon and D. L. Karlen, Bulk density as a soil quality indicator during conversion to notillage, Soil and Tillage Research, vol.78, pp.143-149, 2004.

A. T. Lombardi and O. Garcia, Biological leaching of Mn, Al, Zn, Cu and Ti in an anaerobic sewage sludge effectuated by Thiobacillus ferrooxidans and its effect on metal partitioning, Water Research, vol.36, pp.3193-3202, 2002.

D. Loubry, Livret technique pour la conduite de la revégétalisation sur les surfaces minières alluvionanaires de Guyane, 2002.

D. R. Lovley, Dissimilatory Metal Reduction, Annual Review of Microbiology, vol.47, pp.263-290, 1993.
DOI : 10.1146/annurev.micro.47.1.263

D. R. Lovley, Dissimilatory Fe(III) and Mn(IV) reduction, Microbiological Reviews, vol.55, pp.259-87, 1991.

D. R. Lovley, Organic matter mineralization with the reduction of ferric iron: A review, Geomicrobiology Journal, 1987.

A. E. Lugo, The apparent paradox if reestablishing species richness on degraded lands with tree iiiiiiiiimonocultures, Forestry Ecology and Management, vol.99, pp.9-19, 1997.

Y. Luo, S. Wan, D. Hui, and L. L. Wallace, Acclimatization of soil respiration to warming in a tall 224 grass prairie, Nature, vol.413, pp.622-625, 2001.

M. ,

Z. Ma, M. Zhang, R. Xiao, Y. Cui, and F. Yu, Changes in soil microbial biomass and community composition in coastal wetlands affected by restoration projects in a Chinese delta, Geoderma, vol.289, pp.124-134, 2017.

Y. Malhi and J. Grace, Tropical forests and atmospheric carbon dioxide, Trends in Ecology & Evolution, pp.1906-1912, 2000.
DOI : 10.1016/s0169-5347(00)01906-6

S. Manzoni, J. A. Trofymow, R. B. Jackson, and A. Porporato, Stoichiometric controls on carbon, nitrogen, and phosphorus dynamics in decomposing litter, Ecological Monographs, 2010.

P. A. Maron, C. Coeur, C. Pink, A. Clays-josserand, R. Lensi et al., Use of polyclonal antibodies to detect and quantify the NOR protein of nitrite oxidizers in complex environments, Journal of Microbiological Methods, 2003.

S. Martin, Precipitation and Dissolution of Iron and Manganese Oxides, in: Environmental Catalysis, pp.61-82, 2005.

C. Martínez-garza and H. F. Howe, Restoring tropical diversity: Beating the time tax on species loss, Journal of Applied Ecology, vol.40, pp.423-429, 2003.

R. Mason, W. Fitzgerald, and F. Morel, The biogeochemical cycling of elemental mercury: Anthropogenic influences, Geochimica et Cosmochimica Acta, issue.94, pp.90046-90055, 1994.

C. Mathieu and F. Pieltain, Analyse chimique des sols : Methodes choisies, p.386, 2003.

S. Melero, E. Madej??n, J. C. Ruiz, and J. F. Herencia, Chemical and biochemical properties of a clay soil under dryland agriculture system as affected by organic fertilization, European Journal of Agronomy, vol.26, pp.327-334, 2007.

R. Miao, D. Jiang, A. Musa, Q. Zhou, M. Guo et al., Effectiveness of shrub planting and grazing exclusion on degraded sandy grassland restoration in Horqin sandy land in Inner Mongolia, Ecological Engineering, vol.74, pp.164-173, 2015.

A. G. Millhollen, M. S. Gustin, and D. Obrist, Foliar mercury accumulation and exchange for three tree species, Environmental Science and Technology, 2006.

A. Moiroud, A. Capellano, and C. Danière, Un procédé exemplaire de réaménagement et de iiiiiiiiireverdissement des carrières : l'emploi des espèces fixatrices d'azote atmosphérique. Rapport iiiiiiiiifinal. Taxe parafiscale sur les granulats : opération n° 60 EG 161/Laboratoire d'écologie iiiiiiiiimicrobienne de l'université Claude-Bernard, vol.34, 1991.

B. Montabo, Le grand livre de l'histoire de la Guyane: Des origines à 1848, 2004.

P. Mora, E. Miambi, J. J. Jiménez, T. Decaëns, and C. Rouland, Functional complement of biogenic structures produced by earthworms, termites and ants in the neotropical savannas, Soil Biology and Biochemistry, vol.37, pp.1043-1048, 2005.

E. Moreno-jiménez, R. Gamarra, R. O. Carpena-ruiz, R. Millán, J. M. Peñalosa et al., Mercury bioaccumulation and phytotoxicity in two wild plant species of Almadén area, Chemosphere, 2006.

J. L. Mortensen and F. I. Himes, Chemistry of the Soil. Reynolds, pp.206-241, 1964.

J. Murphy and J. P. Riley, A modified single solution method for the determination of phosphate in natural waters, Analytica Chimica Acta, vol.27, pp.31-36, 1962.

R. J. Myers, Temperature effects on ammonification and nitrification in a tropical soil, Soil Biology and Biochemistry, vol.7, pp.83-86, 1975.

J. P. Nakas and D. Klein, Decomposition of microbial cell components in a semi-arid grassland soil, Applied and Environmental Microbiology, vol.38, pp.454-460, 1979.

P. Nannipieri, J. Ascher, M. T. Ceccherini, L. Landi, G. Pietramellara et al., Microbial diversity and soil functions, European Journal of Soil Science, 2003.

P. Nannipieri, E. Kandeler, and P. Ruggiero, Enzyme Activities and Microbiological and Biochemcial Processes in Soil, Enzymes in the Environment: Activity, Ecology, and Applications, 2002.

A. Navarro, Review of characteristics of mercury speciation and mobility from areas of mercury mining in semi-arid environments, Reviews in Environmental Science and Biotechnology, vol.7, pp.287-306, 2008.

C. Neculita, G. J. Zagury, and L. Deschênes, Mercury speciation in highly contaminated soils from chlor-alkali plants using chemical extractions, Journal of Environmental Quality, vol.34, pp.255-62

J. C. Niemeyer, G. B. Lolata, G. M. Carvalho, D. De, E. M. Silva et al., Microbial indicators of soil health as tools for ecological risk assessment of a metal contaminated site in Brazil, Applied Soil Ecology, 2012.

M. Norisada, G. Hitsuma, K. Kuroda, T. Yamanoshita, M. Masumori et al., Acacia mangium, a nurse tree candidate for reforestation on degraded sandy soils in the Malay Peninsula, Forest Science, vol.51, pp.498-510, 2005.

S. Nortcliff, Standardisation of soil quality attributes, pp.161-168, 2002.

C. Noubactep, A. Schöner, H. Dienemann, and M. Sauter, Release of coprecipitated uranium from iron oxides, Journal of Radioanalytical and Nuclear Chemistry, vol.267, pp.21-27, 2005.

J. O. Nriagu, Mercury pollution from the past mining of gold and silver in the Americas, Science of the Total Environment, vol.149, pp.167-181, 1994.

P. A. O'day, D. Vlassopoulos, R. Root, and N. Rivera, The influence of sulfur and iron on dissolved arsenic concentrations in the shallow subsurface under changing redox conditions, Proceedings of the National Academy of Sciences, vol.101, pp.13703-13708, 2004.

R. Ölinger, R. Margesin, E. Kandeler, F. Schinner, R. Öhlinger et al., Enzymes Involved in Phosphorus Metabolism, Methods in Soil Biology, pp.208-227, 1996.

W. Parton, W. L. Silver, I. C. Burke, L. Grassens, M. E. Harmon et al., Global-Scale Similarities in Nitrogen Release Patterns During Long-Term Decomposition, Science, vol.315, pp.361-364, 2007.
DOI : 10.1126/science.1134853

A. J. Poulain, S. M. Ní-chadhain, P. A. Ariya, M. Amyot, E. Garcia et al., Potential for mercury reduction by microbes in the high Arctic, Applied and Environmental Microbiology, 2007.

G. ,

J. Qian, U. Skyllberg, W. Frech, W. F. Bleam, P. R. Bloom et al., Bonding of methyl mercury to reduced sulfur groups in soil and stream organic matter as determined by X-ray absorption spectroscopy and binding affinity studies, Geochimica et Cosmochimica Acta, vol.66, pp.3873-3885, 2002.

J. W. Raich and W. H. Schlesinger, The global carbon dioxide flux in soil respiration and its relationship to vegetation and climate, Tellus B, vol.44, pp.81-99, 1992.

C. R. Rao, A. Sahuquillo, and J. F. Lopez-sanchez, A Review of the Different Methods Applied in Environmental Geochemistry For Single and Sequential Extraction of Trace Elements in Soils and Related Materials, Water, Air, and Soil Pollution, vol.189, pp.291-333, 2008.

L. D. Rasmussen and S. J. Sørensen, Effects of mercury contamination on the culturable heterotrophic, functional and genetic diversity of the bacterial community in soil, FEMS Microbiology Ecology, vol.36, pp.1-9, 2001.

L. D. Rasmussen, S. J. Sørensen, R. R. Turner, and T. Barkay, Application of a mer-lux biosensor for estimating bioavailable mercury in soil, Soil Biology and Biochemistry, vol.32, pp.639-646, 2000.

P. B. Reich, D. F. Grigal, J. D. Aber, and S. T. Gower, Nitrogen mineralization and productivity in 50 hardwood and conifer stands on diverse soils, Ecology, vol.2, 1997.

P. B. Reich, D. W. Peterson, D. A. Wedin, and K. Wrage, Fire and vegetation effects on productivity and nitrogen cycling across a forest-grassland continuum, Ecology, vol.2, p.82, 2001.

A. T. Reis, J. P. Coelho, I. Rucandio, C. M. Davidson, A. C. Duarte et al., Thermodesorption: A valid tool for mercury speciation in soils and sediments, Geoderma, vol.237, pp.98-104, 2015.

A. T. Reis, C. M. Davidson, C. Vale, and E. Pereira, Overview and challenges of mercury fractionation and speciation in soils, TrAC -Trends in Analytical Chemistry, 2016.

J. B. Robinson and O. H. Tuovinen, Mechanisms of microbial resistance and detoxification of mercury and organomercury compounds: physiological, biochemical, and genetic analyses, Microbiological Reviews, vol.48, pp.95-124, 1984.

E. E. Roden and D. R. Lovley, Dissimilatory Fe(III) reduction by the marine microorganism Desulfuromonas acetoxidans, Applied and Environmental Microbiology, 1993.

S. Rose and A. M. Ghazi, Release of sorbed sulfate from iron oxyhydroxides precipitated from acid mine drainage associated with coal mining, Environmental Science and Technology, 1997.

M. Roulet and M. Lucotte, Geochemistry of mercury in pristine and flooded ferralitic soils of a tropical rain forest in French Guiana, South America. Water, Air, & Soil Pollution, vol.80, pp.1079-1088, 1995.

M. Roulet, M. Lucotte, N. Farella, G. Serique, H. Coelho et al., Effects of Recent Human Colonization on the Presence of Mercury in Amazonian Ecosystems, Water, Air, and Soil Pollution, vol.112, pp.297-313, 1999.

M. Roulet, M. Lucotte, A. Saint-aubin, S. Tran, I. Rhéault et al., The geochemistry of mercury in central Amazonian soils developed on the Alter-do-Chao formation of the lower Tapajos River Valley, Para state, Brazil, Science of the Total Environment, vol.223, pp.1-24, 1998.

A. Ruellan and M. Dosso, Regards sur le sol, 1993.

H. W. Ryu, H. S. Moon, E. Y. Lee, K. S. Cho, and H. Choi, Leaching characteristics of heavy metals from sewage sludge by Acidithiobacillus thiooxidans MET, Journal of Environmental Quality, vol.32, pp.751-759, 1999.

B. R. Sabey, W. V. Bartholomew, R. Shaw, and J. Pesek, Influence of Temperature on Nitrification in Soils1, Soil Science Society of America Journal, vol.20, p.357, 1956.

A. A. Safari-sinegani, G. Emtiazi, and H. Shariatmadari, Sorption and immobilization of cellulase on silicate clay minerals, Journal of Colloid and Interface Science, 2005.

K. L. Sahrawat, Factors affecting nitrification in soils, Communications in Soil Science and Plant Analysis, vol.39, pp.1436-1446, 2008.
DOI : 10.1080/00103620802004235

O. E. Sala, F. S. Chapin, J. J. Armesto, E. Berlow, J. Bloomfield et al., Global Biodiversity Scenarios for the Year 2100, Science, vol.287, pp.1770-1774, 2000.

W. Sand, Corrosion Books: Geomicrobiology. By: Henry Lutz Ehrlich -Materials and Corrosion 5, Materials and Corrosion, vol.54, pp.349-349, 2003.

F. Santos-francés, A. García-sánchez, P. Alonso-rojo, F. Contreras, and M. Adams, Distribution and mobility of mercury in soils of a gold mining region, Journal of Environmental Management, 2011.

D. Sarkar, M. E. Essington, and K. C. Misra, Adsorption of Mercury(II) by Kaolinite, Soil Science Society of America Journal, vol.64, 1968.

D. Sarkar, M. E. Essington, and K. C. Misra, Adsorption of mercury(II) by variable charge surfaces of quartz and gibbsite, Soil Science Society of America Journal, 1999.

H. Schimann, R. Joffre, J. C. Roggy, R. Lensi, and A. M. Domenach, Evaluation of the recovery of microbial functions during soil restoration using near-infrared spectroscopy, Applied Soil Ecology, vol.37, pp.223-232, 2007.
URL : https://hal.archives-ouvertes.fr/hal-01032188

H. Schimann, C. Petit-jean, S. Guitet, T. Reis, A. M. Domenach et al., Microbial bioindicators of soil functioning after disturbance: The case of gold mining in tropical rainforests of French Guiana, Ecological Indicators, vol.20, pp.34-41, 2012.
URL : https://hal.archives-ouvertes.fr/hal-01190730

A. Schippers and W. Sand, Bacterial leaching of metal sulfides proceeds by two indirect mechanisms via thiosulfate or via polysulfides and sulfur, Applied and Environmental Microbiology, vol.65, pp.319-321, 1999.

M. Schloter, O. Dilly, and J. C. Munch, Indicators for evaluating soil quality. Agriculture, Ecosystems and Environment, 2003.

J. Schnürer, M. Clarholm, S. Boström, and T. Rosswall, Effects of moisture on soil microorganisms and nematodes: A field experiment, Microbial Ecology, vol.12, 1986.

E. Schubert, K. Mengel, and S. Schubert, Soil pH and Calcium Effect on Nitrogen Fixation and Growth of Board Bean, Agronomy Journal, vol.82, p.969, 1990.

S. Schubert, E. Schubert, and K. Mengel, Effect of low pH of the root medium on proton release, growth, and nutrient uptake of field beans (Vicia faba), Plant and Soil, vol.124, pp.239-244, 1990.

E. Schuster, The behavior of mercury in the soil with special emphasis on complexation and adsorption processes -A review of the literature, Water, Air, & Soil Pollution, vol.56, pp.667-680, 1991.

L. M. Shuman, Fraction method for soil microelements, Soil Science, vol.140, pp.11-22, 1985.

. Ser, Society for Ecological Restoration, 2004.

, SER International Primer on Ecological Restoration

S. Kh and N. , Interactions biomass on the nitrification of pH , process and, Water Pollution Control Federation Journal, vol.58, pp.52-59, 1986.

G. Shukla and A. Varma, Ajit), 2011. Soil enzymology

I. Siddique, V. L. Engel, J. A. Parrotta, D. Lamb, G. B. Nardoto et al., Dominance of legume trees alters nutrient relations in mixed species forest restoration plantings within seven years, Biogeochemistry, vol.88, pp.89-101, 2008.

C. C. Silva, M. L. Guido, J. M. Ceballos, R. Marsch, and L. Dendooven, Production of carbon dioxide and nitrous oxide in alkaline saline soil of Texcoco at different water contents amended with urea: A laboratory study, Soil Biology and Biochemistry, vol.40, pp.1813-1822, 2008.

M. L. Silveira, L. R. Alleoni, G. A. O'connor, and A. C. Chang, Heavy metal sequential extraction methods-A modification for tropical soils, Chemosphere, vol.64, pp.1929-1938, 2006.

A. N. Singh, A. S. Raghubanshi, and J. S. Singh, Impact of native tree plantations on mine spoil in a dry tropical environment, Forest Ecology and Management, vol.187, pp.309-317, 2004.

U. Skyllberg, P. R. Bloom, J. Qian, C. M. Lin, and W. F. Bleam, Complexation of mercury(II) in soil organic matter: EXAFS evidence for linear two-coordination with reduced sulfur groups, Environmental Science and Technology, vol.40, 2006.

U. Skyllberg, K. Xia, P. R. Bloom, E. A. Nater, and W. F. Bleam, Binding of Mercury(II) to Reduced Sulfur in Soil Organic Matter along Upland-Peat Soil Transects, Journal of Environment Quality, vol.29, p.855, 2000.

P. L. Smedley and D. G. Kinniburgh, A review of the source, behaviour and distribution of arsenic in natural waters, Applied Geochemistry, 2002.

J. L. Smith, J. W. Doran, and A. J. Jones, Measurement and Use of pH and Electrical Conductivity for Soil Quality Analysis. Methods for Assessing Soil Quality sssaspecia, pp.169-185, 1996.

A. J. Stams, C. M. Plugge, F. A. De-bok, B. H. Van-houten, P. Lens et al., Metabolic interactions in methanogenic and sulfate-reducing bioreactors, Water Science and Technology, 2005.

S. J. Stemmler and J. Berthelin, Microbial activity as a major factor in the mobilization of iron in the humid tropics, European Journal of Soil Science, 2003.

E. Stokstad, Ecology -Taking the pulse of earth's life-support systems, Science, vol.308, pp.41-43, 2005.

J. A. Subke and M. Bahn, On the "temperature sensitivity" of soil respiration: Can we use the immeasurable to predict the unknown?, Soil Biology and Biochemistry, vol.42, pp.1653-1656, 2010.

A. O. Summers, Organization, Expression, and Evolution of Genes for Mercury Resistance, Annual Review of Microbiology, vol.40, pp.607-634, 1986.

B. H. Svensson and R. Söderland, Nitrogen, phosphorus and sulphur : global cycles. International Council for Science (ICSU), Scientific Committee on Problems of the Environment (SCOPE), 1976.

M. J. Swift, O. Andrén, L. Brussaard, M. Briones, M. M. Couteaux et al., Global change, soil biodiversity, and nitrogen cycling in terrestrial ecosystems: three case studies, Methods of Soil Analysis. Part 2. Microbiological and Biochemical Properties, vol.4, pp.775-833, 1994.

C. Tang, C. Weligama, and P. Sale, Subsurface Soil Acidification in Farming Systems: Its Possible Causes and Management Options, in: Molecular Environmental Soil Science, pp.389-412, 2013.

J. P. Taylor, B. Wilson, M. S. Mills, and R. G. Burns, Comparison of microbial numbers and enzymatic activities in surface soils and subsoils using various techniques, Soil Biology and Biochemistry, vol.34, pp.387-401, 2002.

M. Tejada, C. Benítez, I. Gómez, and J. Parrado, Use of biostimulants on soil restoration: Effects on soil biochemical properties and microbial community, Applied Soil Ecology, vol.49, pp.11-17, 2011.

K. Telmer, M. Costa, R. S. Angélica, E. S. Araujo, and Y. Maurice, The source and fate of sediment and mercury in the Tapajós River, Pará, Brazilian Amazon: Ground-and space-based evidence, Journal of Environmental Management, vol.81, pp.101-113, 2006.

D. Tessier, A. Bruand, Y. Bissonnais, and . Le, Qualité chimique et physique des sols : Variabilité spatiale et évolution. Numéro Spécial Étude et Gestion Des Sols, 1996.

E. Tessier, D. Amouroux, M. Grimaldi, T. Stoichev, C. Grimaldi et al., Mercury mobilization in soil from a rainfall event in a Tropical forest (French Guyana), Journal de Physique IV, vol.107, pp.1301-1304, 2003.
URL : https://hal.archives-ouvertes.fr/hal-01590053

D. Tilman, J. Fargione, B. Wolff, C. D'antonio, A. Dobson et al., Forecasting Agriculturally Driven Global Environmental Change, Science, vol.292, pp.281-284, 2001.

N. Tripathi and R. S. Singh, Ecological restoration of mined-out areas of dry tropical environment, India. Environmental Monitoring and Assessment, 2008.

R. P. Udawatta, R. J. Kremer, B. W. Adamson, and S. H. Anderson, Variations in soil aggregate stability and enzyme activities in a temperate agroforestry practice, Applied Soil Ecology, 2008.

S. M. Ullrich, T. W. Tanton, and S. A. Abdrashitova, Mercury in the aquatic environment: A review of factors affecting methylation, Critical Reviews in Environmental Science and Technology, 2001.

I. M. Unger, A. C. Kennedy, and R. Muzika, Flooding effects on soil microbial communities, Applied Soil Ecology, vol.42, pp.1-8, 2009.
DOI : 10.1016/j.apsoil.2009.01.007

V. Valentim, J. Santos, M. Varón-lópez, C. R. Fonsêca-sousa-soares, P. Lopes-leal et al., Biological attributes of rehabilitated soils contaminated with heavy metals, Environmental Science and Pollution Research, vol.23, pp.6735-6748, 2016.

F. A. Vega, M. L. Andrade, and E. F. Covelo, Influence of soil properties on the sorption and retention of cadmium, copper and lead, separately and together, by 20 soil horizons: Comparison of linear regression and tree regression analyses, Journal of Hazardous Materials, vol.174, pp.522-533, 2010.

M. Veiga, J. Hinton, and C. Lilly, Mercury in the Amazon: a comprehensive review with special emphasis on bioaccumulation and bioindicators, in: NIMD (National Institute for Minamata Disease) Forum'99, 1999.

M. M. Veiga and R. F. Baker, Protocols for Environmental and Health Assessment of Mercury Released by Artisanal and Small-scale Gold Miners, 2004.

M. M. Veiga, P. A. Maxson, and L. D. Hylander, Origin and consumption of mercury in small-scale gold mining, Journal of Cleaner Production, vol.14, pp.436-447, 2006.

E. Velasquez, P. Lavelle, E. Barrios, R. Joffre, and F. Reversat, Evaluating soil quality in tropical agroecosystems of Colombia using NIRS, Soil Biology and Biochemistry, 2005.

R. M. Viana, J. B. Ferraz, A. F. Neves, G. Vieira, and B. F. Pereira, Soil quality indicators for different restoration stages on Amazon rainforest, Soil and Tillage Research, vol.140, pp.1-7, 2014.

J. Vié, C. Hilton-taylor, and S. N. Stuart, Wildlife in a changing world -An analysis of the 2008 IUCN Red List of Threatened Species, 2008.

K. Vig, M. Megharaj, N. Sethunathan, and R. Naidu, Bioavailability and toxicity of cadmium to microorganisms and their activities in soil: A review, Advances in Environmental Research, 2003.

P. M. Vitousek and R. W. Howarth, Nitrogen limitation on land and in the sea: How can it occur? Biogeochemistry, 1991.

T. S. Walker, Root Exudation and Rhizosphere Biology, PLANT PHYSIOLOGY, vol.132, pp.44-51, 2003.
DOI : 10.1104/pp.102.019661
URL : http://www.plantphysiol.org/content/132/1/44.full.pdf

W. Junior, H. E. Leonhardt-palmieri, M. C. Otavio-eurico-de-aquino, C. Branco, P. M. Filho et al., Speciation, distribution, and transport of mercury in contaminated soils from Descoberto, Journal of Environmental Monitoring, vol.11, pp.1056-1063, 2009.

J. Wang, X. Feng, C. W. Anderson, W. Zhu, R. Yin et al., Mercury distribution in the soil-plant-air system at the Wanshan mercury mining district in Guizhou, Southwest China, Environmental Toxicology and Chemistry, vol.30, pp.2725-2731, 2011.

Y. Wang, J. Shi, H. Wang, Q. Lin, X. Chen et al., The influence of soil heavy metals pollution on soil microbial biomass, enzyme activity, and community composition near a copper smelter, Ecotoxicology and Environmental Safety, vol.67, pp.75-81, 2007.

J. C. Wasserman, S. S. Fundação, O. Cruz, and M. Wasserman, Biogeochemistry of Mercury in the Amazonian Environment Mercury Exposure in Yanomami Indigenous Communities in the sate of Roraima View project Fate of nanoparticles in the environment View project 32, 2003.

C. J. Watras and J. W. Huckabee, Mercury Pollution Integration and Synthesis, 1994.

J. H. Weber, Review of possible paths for abiotic methylation of mercury(II) in the aquatic environment, Chemosphere, 1993.

D. C. White, C. A. Flemming, K. T. Leung, and S. J. Macnaughton, In situ microbial ecology for quantitative appraisal, monitoring, and risk assessment of pollution remediation in soils, the subsurface, the rhizosphere and in biofilms, Journal of Microbiological Methods, 1998.

F. Widdel, Microbiology and ecology of sulfate-and sulfur-reducing bacteria, Zender AJB (Ed) Biology of Anaerobic Microorganisms, 1998.

M. Wong, Ecological restoration of mine degraded soils, with emphasis on metal contaminated soils, Chemosphere, vol.50, pp.775-780, 2003.

Y. Xian, M. Wang, and W. Chen, Quantitative assessment on soil enzyme activities of heavy metal contaminated soils with various soil properties, Chemosphere, vol.139, pp.604-608, 2015.

L. W. Xie, J. Zhong, F. X. Cao, J. J. Li, and L. C. Wu, Evaluation of soil fertility in the succession of karst rocky desertification using principal component analysis, Solid Earth Discussions, vol.6, pp.3333-3359, 2014.

H. Xu and B. Allard, Effects of a fulvic acid on the speciation and mobility of mercury in aqueous solutions, Water, Air, & Soil Pollution, 1991.

L. Xu, X. Wu, S. Wang, Z. Yuan, F. Xiao et al., Speciation change and redistribution of arsenic in soil under anaerobic microbial activities, Journal of Hazardous Materials, vol.301, pp.538-546, 2016.

Z. Xu and C. Chen, Fingerprinting Global Climate Change and Forest Management Within Rhizosphere Carbon and Nutrient Cycling Processes, Area, vol.13, pp.293-298, 2006.

Z. Xu, C. Chen, J. He, and J. Liu, Trends and challenges in soil research 2009: Linking global climate change to local long-term forest productivity, Journal of Soils and Sediments, vol.9, pp.83-88, 2009.

D. Yang, D. Zeng, R. Mao, and L. Li, Restoration effect of young plantations on magnesite mine spoil in Northeast China, 2010 4th International Conference on Bioinformatics and Biomedical Engineering, 2010.

Y. Yang, Y. Chen, G. Tian, and Z. Zhang, Microbial activity related to N cycling in the rhizosphere of maize stressed by heavy metals, Journal of Environmental Sciences, 2005.

S. D. Young, Heavy Metals in Soils: Trace Metals and Metalloids in Soils and Their Bioavailability, pp.51-95, 2012.

T. Zhou, P. Shi, D. Hui, and Y. Luo, Global pattern of temperature sensitivity of soil heterotrophic respiration (Q10) and its implications for carbon-climate feedback, Journal of Geophysical Research: Biogeosciences, 2009.

W. Zhou, D. Hui, and W. Shen, Effects of soil moisture on the temperature sensitivity of soil heterotrophic respiration: A laboratory incubation study, PLoS ONE, 2014.

L. Zhu, Q. Xiao, Y. Shen, S. Li, and . Qing, Microbial functional diversity responses to 2 years since biochar application in silt-loam soils on the Loess Plateau, Ecotoxicology and Environmental Safety, 2017.