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Abstract We performed within-breed genomic prediction analyses using genomic best linear unbiased prediction (GBLUP) method. Besides Bovine50k BeadChip (50k) markers, in GBLUP, we used one or several (genetic) variance components to investigate the effect of imputed whole-genome sequence (WGS) variants and large chromosomal deletions (deletions), Genome Biol, vol.10, p.42, 2009. ,
Nordic Red Dairy cattle (RDC) populations of artificial insemination bulls. In HOL, we observed same prediction accuracy (0.639) using either 50k (one-component model) or 50k and deletion markers (two-component model), JER ,
, FI associated markers (in two-component model) vs. that of only 50k markers (one-component model)
, Key words: genomic prediction, large deletion, fertility, GBLUP, dairy cattle 6.6 References
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